AIBench - AI workBench!

What is AIBench?

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AIBench is a lightweight, non-intrusive, MVC-based Java application framework that eases the connection, execution and integration of operations with well defined input/output. This basic idea provides a powerful programming model to fast develop applications given that:

The logic can be decoupled from the user interface.
The interconnection of operations can also be decoupled based in the idea of “experiments”.
The programmer is forced to “think-before-program”, easing the code reuse.

Citing AIBench
Please, cite our framework in your research software developed with AIBench:

D. Glez-Peña, M. Reboiro-Jato, P. Maia, F. Díaz, F. Fdez-Riverola (2010) AIBench: a rapid application development framework for translational research in biomedicine. Computer Methods and Programs in Biomedicine. doi:10.1016/j.cmpb.2009.12.003

AIBench SDK 2.1

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Here is a new version of the AIbench framework. It is now available at SourceForge.
Please, see the release notes.

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OptFlux

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	The OptFlux application includes a number of tools to support in silico metabolic engineering. The application allows the user to load a genome-scale model of a given organism. This will serve as the basis to simulate the wild type and mutants (original strain with a set of selected gene deletions).
The OptFlux application is being developed taking as a basis the AIBench framework. This is an environment for the development of Data Mining/ Bioinformatics tools, using the Java programming language. The details of this project, a collaboration between the universities of Minho (Portugal) and Vigo (Spain), as well as updated documentation can be found at the web site.

AIBench Wiki

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We have starting the AIBench Wiki . It is a new documentation resource intended to help the community to share it's experiences developings applications with this framework. Please help us to fill it.

AIBench SDK 2.0

1970-01-01T01:33:28+0000

Here is the second major version of the AIbench framework.

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AIBench SDK 2.0beta1

1970-01-01T01:33:27+0000

This is the first beta release of the AIbench's Core SDK 2.0. It has lots of new features. The list of new features and the full documentation will be available soon (stay tuned!)

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CCTC and CEB Uses AIBench

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	Researchers from the Computer Science and Technology Center (CCTC) and the Centre of Biological Engineering (CEB) are developing two software applications based on AIBench:
OptGene. An application which includes a number of tools for in-silico Metabolic Engineering. @Note. A workbench meant for both Biological Text Mining research and curation.

AIBench 2.0beta1 Quick Start

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In this slides, you can find a Quick Start to AIBench, including stuff from the incoming major release of AIBench: 2.0

FICHUVI uses AIBench

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The Biomedical Foundation of the Hospital of Vigo (Spain) (FICHUVI), has started a new development in the Bioinformatics field based on AIBench.

AIBench SDK 1.9.1

1970-01-01T01:33:26+0000

This is the first public release of the AIbench's Core SDK. You can download it and start playing with this new framework!

The instructions to install it can be found in the Programmers Manual.

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